Identification and Bioinformatics Analysis of Thaumatin-like Protein Family in Daucus carota
LIU Chao,HAN Li-hong,WANG Hai-bo,SONG Pei-bing,TANG Li-zhou*
Center for Yunnan Plateau Biological Resources Protection and Utilization,College of Biological Resource and Food Engineering,Key Laboratory of Yunnan Province Universities of the Diversity and Ecological Adaptive Evolution for Animals and Plants on YunGui Plateau,Qujing Normal University,Qujing 655011,Yunnan,China
This study analyzed and identified gene structure and phylogenesis of 32 carrot thaumatinlike proteins through genome database and bioinformatics method. The results showed that the carrot TLP genes distributed on eight out of nine chromosomes,the protein sequences were more conserved. The phylogeny analysis showed that carrot TLPs were classified into 10 evolutionary groups,most members of group fifth derived from chromosome one,which have potential antifungal activity.
刘 潮 韩利红 王海波 宋培兵 唐利洲*. 胡萝卜类甜蛋白家族鉴定与生物信息学分析[J]. 中国蔬菜, 2017, 1(2): 38-.
LIU Chao,HAN Li-hong,WANG Hai-bo,SONG Pei-bing,TANG Li-zhou*. Identification and Bioinformatics Analysis of Thaumatin-like Protein Family in Daucus carota. China Vegetables, 2017, 1(2): 38-.